Biblio

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2014
2012
Pu, Y., S. Lee, L. T. Watson, and Y. Cao, "The effect of unhealthy-cells in synchronized insulin secretion", 2012 IEEE Internat. Conf. on Bioinformatics and Biomedicine, Philadelphia, PA, pp. 416--419, 2012.
2010
Pu, Y., S. Lee, D. C. Samuels, L. T. Watson, and Y. Cao, "Hybrid modeling and simulation of insulin secretion pathway in pancreatic islets", 10th IEEE Internat. Conf. on Bioinformatics and Bioengineering, Philadelphia, PA, pp. 156-161, 2010.
Cao, Y., S. I. Park, and L. T. Watson, "A novel computation-to-core mapping scheme for robust facet image modeling on GPUs", 2010 Internat. Conf. on Parallel and Distributed Processing Techniques and Appl., vol. 1, Las Vegas, NV, CSREA Press, pp. 189-195, 2010.
Pu, Y., L. T. Watson, and Y. Cao, "Stiffness detection and reduction in discrete stochastic simulation of biochemical systems", 2010 Spring Simulation Multiconference, High Performance Computing Symp., Vista, CA, Soc. for Modelling and Simulation Internat., pp. 41-48, 2010.
2009
Zhang, J., L. T. Watson, and Y. Cao, "Adaptive aggregation method for the Chemical Master Equation", International Journal of Computational Biology and Drug Design, vol. Volume 2, pp. 134 - 148, 2009.
Zhang, J., M. Sosonkina, L. T. Watson, and Y. Cao, "Parallel solution of the chemical master equation", Proc. 2009 Spring Simulation Multiconference: HPC, San Diego, CA, pp. 563–567, 2009.
Zhang, J., L. T. Watson, and Y. Cao, "Radial basis function collocation for the chemical master equation", Conf. on Bioinformatics and Computational Biology, pp. 295–300, 2009.
Ponce, S., D. Patnaik, Y. Cao, and N. Ramakrishnan, "Accelerator-Oriented Algorithm Transformation for Temporal Data Mining", Proceedings of 6th IFIP International Con- ference on Network and Parallel Computing (NPC'09), Gold Coast, Australia, 10/2009.
Liu, Z., and Y. Cao, "Stochastic Simulation Methods for Biochemical Models with Multi-State Species", Proceedings to 2009 IEEE Toronto International Conference Science and Technology for Humanity, pp. 363-368, 09/2009.
Liu, Z., Y. Pu, and Y. Cao, "A Hybrid Method Combining Improved StochSim with SSA for Solving Systems with Multi-State Species", Proceedings of the 2009 International Conference on Bioinformatics & Computational Biology, Las Vegas, Nevada, pp. 626 631, 07/2009.
Pu, Y., S. Lee, Z. Liu, D. Samuels, L. T. Watson, and Y. Cao, "Medeling of Metabolic Oscillations in Mitochondria and their Coupling in a Cell", Medeling of Metabolic Oscillations in Mitochondria and their Coupling in a Cell, Las Vegas, Nevada, pp. 620 625, 07/2009.
Ahn, T. - H., P. Wang, L. T. Watson, Y. Cao, C. A. Shaffer, and W. T. Baumann, "Stochastic cell cycle modeling for budding yeast", Proceedings of 2009 Spring Simulation Multiconference: HPC, G. Wainer, M. Chinni, P. Roman, H. Rajaei, B. Zeigler, and C. Ribbens (eds.), Soc. for Modeling Simulation Internat., San Diego, CA, SCS, pp. 569-574, 03/2009.
Zhang, J., L. T. Watson, and Y. Cao, "Adaptive aggregation method for the chemical master equation", Internat J. Comput. Biol. Drug Design, vol. 2, pp. 134-148, 2009.
Pu, Y., S. Lee, Z. Liu, D. C. Samuels, L. T. Watson, and Y. Cao, "Modeling of metabolic oscillations in mitochondria and their coupling in a cell", Proc. 2009 Internat. Conf. on Bioinformatics and Computational Biology, H. R. Arabnia and M. Q. Yang (eds.), USA, CSREA Press, pp. 620-625, 2009.
Zhang, J., M. Sosonkina, L. T. Watson, and Y. Cao, "Parallel solution of the chemical master equation", Proc. 2009 Spring Simulation Multiconference: HPC, G. Wainer, M. Chinni, P. Roman, H. Rajaei, B. Zeigler, and C. Ribbens (eds.), Soc. for Modeling Simulation Internat., San Diego, CA, pp. 563-567, 2009.
Zhang, J., L. T. Watson, and Y. Cao, "Radial basis function collocation for the chemical master equation", Proc. 2009 Internat. Conf. on Bioinformatics and Computational Biology, H. R. Arabnia and M. Q. Yang (eds.), USA, CSREA Press, pp. 295-300, 2009.
2008
Xie, L., M. Kumar, Y. Cao, D. Gracanin, and F. Quek, "Data-driven motion estimation with low-cost sensors", Proceedings of the Fifth International Conference on Visual Information Engineering, July -Aug, 2008.
Cho, Y. J., N. Ramakrishnan, and Y. Cao, "Reconstructing Chemical Reaction Networks: Data Mining meets System Identification", 14th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (KDD'08), Feb, 2008.
Liu, Z., and Y. Cao, "Detailed comparison between StochSim and SSA", IET Systems Biology, vol. 2, issue 5, pp. 334, 2008.
Huang, J., S. P. Ponce, S. I. Park, Y. Cao, and F. Quek, "GPU-Accelerated Computation for Robust Motion Tracking Using the CUDA Framework", The 5th IET Visual Information Engineering 2008 Conference (VIE'08), 07/2008.